BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB005G09LP1|AL425428
(921 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1782 1407 0.0
>3x_Contig1782
Length = 24703
Score = 1407 bits (687), Expect = 0.0
Identities = 842/921 (91%), Gaps = 2/921 (0%)
Strand = Plus / Minus
Query: 1 atccatgaaaagaatatgaacatgagaaagttcaaaatgkttaatmwttggctgcttaaa 60
|||||||||| |||||| ||||||| ||||||||||||| ||||| |||||||||||||
Sbjct: 22974 atccatgaaaggaatattaacatgacaaagttcaaaatgtttaatctttggctgcttaaa 22915
Query: 61 taaaaatacatccttctaamtttgaaawagttgtgaatgaattcatatcgaagagkaawc 120
||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||| || |
Sbjct: 22914 taaaaattcatccttctaactttgaaatagttgtgaatgaattcatatcgaagagtaatc 22855
Query: 121 acggagcagcttatwgattgtgcggaaaamaataatawwtkkctgtaaggwcccaatgtt 180
|||||||||||||| |||||||||||||| ||||||| | |||||||| |||||||||
Sbjct: 22854 acggagcagcttattgattgtgcggaaaacaataatatttttctgtaaggtcccaatgtt 22795
Query: 181 tcgttttatcwcttaattcttgtagccagaagwaaaaacatcccgcaaacgactaagtaa 240
||||||| || |||||||||||| |||||||| | ||||||||||||||||||||||||
Sbjct: 22794 tcgttttttctcttaattcttgttgccagaagtataaacatcccgcaaacgactaagtat 22735
Query: 241 aggaacgtcaatattttcaagtawttgtcgwwtttcaaattgttccataattccaattwc 300
||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||| |
Sbjct: 22734 aggaacgtcaatattttcaagtatttgtcgtttttcaaattgttccttaattccaatttc 22675
Query: 301 ctaawcaaatcwtgwtgttctgckgtatccatcgggaagaaagacaagccatccggcacg 360
|||| |||||| || |||||||| |||||||||||||||||||||| |||||||||||||
Sbjct: 22674 ctaatcaaatcttgttgttctgctgtatccatcgggaagaaagacatgccatccggcacg 22615
Query: 361 tctgagattgattccacatcactatcatttaacatgtgattaagaacttcattatccaac 420
|||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22614 tctgagtttgattcctcatcactatcatttaacatgtgattaagaacttcattatccaac 22555
Query: 421 cttctgagtttagacatgataactccagctcaatgacttatmtccccccagaaatagtcc 480
||||||||| ||||||||||| ||||||||||||| ||| | ||||||||||||||||||
Sbjct: 22554 cttctgagtctagacatgatatctccagctcaatgtctt-tctccccccagaaatagtcc 22496
Query: 481 gttgtttaattcaaawgawactaacctaaaawtcgctcttcttctcaccaataagggaat 540
|||||||||||| || || |||||||||||| |||||||||||||||||||||||||| |
Sbjct: 22495 gttgtttaattcgaatgatactaacctaaaattcgctcttcttctcaccaataagggatt 22436
Query: 541 gaatgattttgggttcgaaagtgtaaatttwtattttwwwaaaaaaaggaatccttctct 600
|| ||||||||||||||| || ||| ||| | |||| | |||||||||||||
Sbjct: 22435 gattgattttgggttcgattgtttaattttttttttttttttattttggaatccttctct 22376
Query: 601 ctggttaggcgtttkatccaccattgttgtctgttaaattwcgaagagaggtccgttgaa 660
|||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 22375 ctggttaggcgtttgatccaccattgttgtctgtgaaattacgaagagaggtccgttgaa 22316
Query: 661 aggttgcttgctgtattcggtccgcttkccgcataagggatttttagtttttttttttcc 720
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 22315 aggttgcttgctgtattcggtccgcttgccgcataagggatttttagtttttttttttcc 22256
Query: 721 tatyagatcwtktkcgtaacatagtaacggccggcttaggtgccgtaaatttgaagattt 780
||| ||||| | | ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22255 tatcagatcttgtgcgttacatagtaacggccggcttaggtgccgtaaatttgaagattt 22196
Query: 781 gaagactttgatcctcaaatagaattggggcactttttwtaaacygawgctcaagctccy 840
|||||||||||||||||||||||||||||||||||||| ||||| || |||||||||||
Sbjct: 22195 gaagactttgatcctcaaatagaattggggcactttttataaactgatgctcaagctcct 22136
Query: 841 atttaggtcagcayttgaatacacttctcacccaagagtgccataggaagactagactgt 900
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22135 atttaggtcagcttttgaatacacttctcacccaagagtgccataggaagactagactg- 22077
Query: 901 tggacattkaatgcaaaaatc 921
|||||||| ||||||||||||
Sbjct: 22076 tggacattgaatgcaaaaatc 22056
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.42 0.718 1.34
Gapped
Lambda K H
1.42 0.718 1.34
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 10,263
Number of Sequences: 1807
Number of extensions: 10263
Number of successful extensions: 233
Number of sequences better than 1.0e-20: 1
length of query: 921
length of database: 10,358,551
effective HSP length: 16
effective length of query: 905
effective length of database: 10,329,639
effective search space: 9348323295
effective search space used: 9348323295
T: 0
A: 40
X1: 5 (10.2 bits)
X2: 14 (28.7 bits)
S1: 11 (23.0 bits)
S2: 49 (100.9 bits)